1. Preliminary Steps

1.1 Create Treatment Prescription

1. Open Prescription Interface

  • Quicklinks > Prescribe treatment
Quicklinks Menu

2. Create New Course

  • Create new treatment course if one doesn't exist
  • Naming convention: Use suffix a (indicates brachytherapy)
  • Example: C1a
Create Course

3. Select Template

  • Template: HDR Cylinder (Shared)
  • Verify auto-populated fields match patient requirements
Template Selection

4. Verify Prescription Parameters

The template auto-populates the fields. Confirm the following values match patient requirements:

Template Fields
  • Fractions: 3 (with EBRT boost) or 5 (monotherapy)
  • Total Prescribed Dose: 3000.0 cGy
  • Dose per Fraction: 600.0 cGy
  • Primary/Boost: Select appropriate option
  • Notes: Record cylinder diameter (e.g., "2.5 cm diameter cylinder, 4 cm treatment length")
Verification

Check the Clinical Treatment Planning Note to confirm total prescription matches plan.

Clinical Note

5. Save Draft

  • Click SAVE AS DRAFT
Save as Draft
Do Not Approve Yet

Saving as draft prevents premature physician approval before physics review is complete.

2. Contouring

2.1 Confirm Cylinder Dimensions

6. Measure Cylinder Diameter

  • Open patient in contouring application
  • Click Distance tool Distance tool icon to measure
  • Measure cylinder diameter
  • Round to nearest standard size (2.5 cm or 3.0 cm)
Distance Measurement

7. Update CT Study Name

  • Right-click CT study icon > Properties
  • ID field: Rename to HDR_CYL_XXmm (where XX = diameter in mm)
  • Alternative naming: HDR CYL X.X cm (some physicists prefer cm)
CT Properties
Naming Convention

This CT name will be used for the plan name in subsequent steps.

2.2 Load Contour Template

8. Add Structure Set

  • Option A: Structure menu > New Structures From Clinical Protocol > HDR CYL Dunn > Attach... > OK
  • Option B: Right-click CT > New Structures From Clinical Protocol

2.3 Contouring Guidelines

General Principles:

  • Contour ≥2 cm superior to cylinder tip (dose becomes negligible beyond this point)
  • Skip 2–3 slices between contours, then use Interpolate Structure
  • Verify interpolated contours on all slices before proceeding
  • Use abdominal windowing to distinguish bowel wall from contents
  • Check coronal and sagittal views to ensure anatomical continuity
Contour Interpolation Contour Review

2.3.1 Cylinder

9. Contour Cylinder

  • Method 1 (Adaptive brush): Set radius large enough to capture full cross-section with single click
  • Method 2 (Fixed brush): Use circular brush matching cylinder diameter; adjust near dome and tip

2.3.2 Rectum

10. Contour Rectum

  • Inferior boundary: Start ≥2 cm below active treatment length
  • Superior boundary: Extend to rectosigmoid junction (where bowel deviates laterally/anteriorly, ~S2–S3 level)
  • Critical: Maintain clear tissue plane between rectum and cylinder (should not touch)
CT Appearance

Rectum appears as tubular structure posterior to cylinder; may contain air (dark) or soft tissue density (gray).

2.3.3 Sigmoid Colon

11. Contour Sigmoid

  • Starting point: Rectosigmoid junction (where rectum curves anteriorly/laterally)
  • Superior extent: Continue 2–3 cm above cylinder tip
  • Include all visible segments even if appearing discontinuous on axial slices
  • Verify continuity using coronal/sagittal views

2.3.4 Bowel Bag

12. Contour Bowel Bag

  • Definition: Small bowel and remaining bowel loops not contoured as rectum/sigmoid
  • Superior boundary: 2 cm above cylinder tip
  • Inferior boundary: Top edge of cylinder
  • Exclude: Muscle, bone, bladder, uterus, major vessels, rectum, sigmoid
Bowel Bag Example

3. Plan Creation

3.1 Load Patient Data

13. Open Course and Structure Set

  • Open Objects
  • Highlight Patient > Select relevant course > Apply
  • If not already done, name the course C1a
  • Expand All Structure Sets > Highlight CT_1 > Apply

3.2 Add Clinical Protocol

14. Insert Protocol Reference

  • Select course (e.g., C1a) > Insert > New Clinical Protocol Reference
  • Click Next > Select HDR CYL Dunn > Select
Viewing Unapproved Protocols

Check box for unapproved protocols to see HDR CYL Dunn.

Clinical Protocol

3.3 Create Plan from Template

15. Insert New Plan

  • Select course > Insert > New Plan from Template
  • Select prescription (e.g., HDR Vaginal Cuff) > Next
RT Prescription

16. Select Plan Template

  • Enable viewing of approved and unapproved templates
  • Search for HDR CYL Xcm (where X = cylinder diameter)
  • Select matching template
Plan Template

17. Configure Plan Settings

  • Target structure: Cylinder > Next
Target Structure
  • Primary reference point: Cylinder > Next
Reference Point
  • Verify dose per fraction and total dose match prescription > Next
Dose Parameters
Protocol Association

If plan is not associated with clinical protocol, double-click plan name > Select relevant Protocol Plan.

Protocol Plan

3.4 Position Applicator

18. Orient CT Views

  • Use Rotate tool Rotate tool to align cylinder vertically
  • Align sagittal and coronal planes so orthogonal plane markers run along cylinder middle
CT Rotation

19. Align Template with CT

  • Click applicator to select applicator icon (turns blue when selected)
  • Use Move applicator move tool and Rotate applicator rotate tool tools
  • Align template with CT-visible cylinder
Applicator Alignment

3.5 Configure Dose Display

20. Set Isodose Levels (Choose preferred option)

Option A (Three levels):

  • Click elements on top left corner of axial plane
  • 200% = Yellow
  • 100% = Red
  • 50% = Blue
  • Units: Set to absolute by clicking [%] symbol so it becomes [cGy]
Dose Display Option A

Option B (Two levels):

  • Right-click Dose Dose icon > Uncheck Absolute Dose (if checked)
  • Right-click Dose again > Isodose Levels
  • Keep only 100% (red) and 200% (white) checked in 2D and 3D
  • Apply > OK
Dose Display Option B

3.6 Set User Origin and Default Views

21. Position Crosshairs

  • Move sagittal and coronal crosshairs so planes run along cylinder central axis
  • Move axial plane to 3 mm (one slice) above cylinder tip

22. Set User Origin

  • Right-click User Origin User Origin icon > Set User Origin
  • Under Set to Predefined Target: Viewing Plane Intersections > Apply > OK
User Origin
Quick Navigation

Double-click User Origin icon to return to this position, or right-click and select 'Move Viewing Planes To User Origin'.

23. Set Default Viewing Planes

  • Return to User Origin
  • Zoom out to display entire dose distribution
  • Click Set Default Viewing Planes Set Default button button
  • Set to Current > OK
Default Viewing Planes
  • Click Reset Geometry Reset Geometry to return to this setup
Physician Preference

Ensure cylinder is positioned high enough in view to show complete dose curves.

Full Dose Display

3.7 Add Clinical Goals

24. Configure Plan for Single Fraction

  • Verify plan properties show no Protocol Plan
  • Confirm Number of fractions: 1
Plan Properties

25. Load Clinical Goals

  • Planning > Add or Edit Clinical Goals...
  • In Clinical Goal Templates, find and select HDR Cylinder Dunn_1Fx
Clinical Goals

26. Verify Goals

  • Right-click top right window > Show Dose Volume Histogram View
  • Dose Statistics tab: Check all OARs (except body) for DVH display
  • Plan Objectives tab: Confirm all goals are green/passing
DVH View

27. Complete Treatment Planning Task

  • Option A: QuickLinks > EMR > Care Path > Right-click task > Completed
  • Option B: Check Tasks in Aria > Change Physics-Brachy status to Completed
Awaiting Physician Approval

Plan is now ready for physician review and approval/modification.

Task Complete

4. Mobius Secondary Calculation

4.1 Create Reference Point

28. Position Reference Point

  • Double-click User Origin icon User Origin
  • On coronal slice, align sagittal crosshairs with cylinder edge
  • Use Measure Distance tool Measure tool: Measure 2 cm down/inferior from user origin
  • Move crosshairs to cylinder surface at this distance

29. Create Mobius Point

  • Right-click Reference Points > New Reference Point And Location
  • Click anywhere on images
  • Name: Mobius
  • Type: Target
  • OK

30. Position Point Precisely

  • On coronal plane, move horizontal (axial) and vertical (sagittal) plane indicators to intersect cylinder side
  • Right-click Mobius > Move Reference Point To Viewing Planes Intersection
Mobius Reference Point

4.2 Export to Mobius

31. Send Plan to Mobius

  • Right-click plan name (e.g., HDR_CYL_3cm) > Export > Mobius3D - Server 3
  • Click blue arrow blue arrow (left corner) > Authorize
  • Verify all files transferred successfully
Mobius Export Export Status
Fraction Count

Ensure number of fractions is set to 1 before export.

Server Access

You need server account credentials. Confirm current recommended server with senior staff.

Mobius Server IPs:

Server Name IP Address
Mobius Server 1 10.177.8.43
Mobius Server 2 10.177.8.70
Mobius Server 3 10.110.16.21

5. Post-Planning Documentation

5.1 Mobius Verification

32. Access Mobius Report

  • Navigate to Mobius Server (IP: 10.110.16.21)
  • Log in with credentials
  • Click patient name > Open PDF Report (third icon from left)
Mobius Patient List PDF Report

33. Verify Agreement

  • Scroll to bottom of plan data
  • Confirm percent difference shows green checkmark (Mobius 2nd Check & Eclipse agree within tolerance)
  • Save report to P-drive as 4-mobius
  • Path: P:\1. Methodist Dunn\3B. HDR Bravos Dunn\1. HDR Patient QA

34. Clean Up

  • Return to Eclipse plan
  • Delete Mobius reference point
Reference Point Cleanup

Mobius point only needed for calculation documentation; removing improves screenshot clarity.

5.2 Generate Eclipse Documentation

Fraction Count

Reset number of fractions in plan properties to full amount (3 or 5) before generating documentation.

35. Create Plan Report

  • File > Print > Report
  • Printer: Adobe PDF
  • Layout: BrachyFull.tml
  • OK
  • Save to patient path as 1-report
Plan Report

36. Create DVH Report

  • Dose Statistics tab: Check all structures for DVH display
  • Click DVH panel (top right)
  • Right-click > Print DVH Report > OK
  • Save to patient path as 3-dvh

37. Create Orthogonal Views Screenshot

  • Double-click User Origin
  • Display Clinical Goals tab in bottom panel
  • File > Print > Screen
  • Properties > Layout: Change to Landscape
  • Save as 2-iso

38. Combine Documents

  • Select all files (1-report, 2-iso, 3-dvh, 4-mobius)
  • Right-click > Combine files in Acrobat
Combine PDFs

5.3 Create Imaging Course

39. Add New Course

  • QuickLinks > Treatment Planning > External Beam Planning
  • Insert > New Course...
  • Name: C1a-Imaging (or C2a-Imaging for second brachytherapy course)

40. Create Imaging Plan

  • Insert > New Plan from Template... > DunnBravosSU > Next
  • Select C1a-Imaging course > Next
  • Treatment unit: Omega > Next
  • Keep default dose settings > Next
  • Target: Cylinder or check No plan target
  • Primary reference point: User Origin > Next
  • Isocenter placement: At image origin > Next
  • Patient position: Head First-Supine

41. Configure DRR

  • Right-click DRR icon > Edit DRR
  • Select Abdomen.dps
  • Check Apply to all fields > Apply
DRR Settings

42. Set Treatment Parameters

  • QuickLinks > Treatment Management > Treatment Preparation
  • Tolerance table: Non-Index
  • Imager Vrt: 50.0 cm
Treatment Preparation

5.4 Configure Dose Limits

43. Set Reference Point Limits

  • Return to Brachytherapy Planning
  • Double-click reference point (Cylinder, CTV, etc.)
  • In Dose Limits section:
    • Total: (Number of fractions × 600 cGy)
    • Daily Dose Limit: 600 cGy (or 1200 cGy for BID regime)
    • Session Dose Limit: 600 cGy
  • Apply > OK
Dose Limits
Purpose

Dose limits enable plan approval and allow dosimetry monitoring across fractions. Without this, planning approval will show warnings about inability to monitor plan dosimetry.

5.5 Approve Plans

44. Approve HDR Plan

  • Right-click plan > Plan Approval > Planning Approved
  • Acknowledge minor warnings (unapproved/rejected structures)
  • Enter credentials for verification
Approval Status Indicators

Blue box = Planning Approved. Green box = Treatment Approved (appears later).

45. Approve Imaging Course

  • Right-click DunnBravosSU plan > Plan Approval > Planning Approved > Next
  • Check Continue planning approval without calculating dose and/or MUs
  • Continue until prompted for password

6. Import Documents to Aria

6.1 Upload Combined Plan Document

46. Import Combined PDF

  • Quicklinks > Documents
  • Click Import (NOT "New")
  • Select combined PDF from patient folder

47. Configure Document Properties

  • Authored By: Your name
  • Supervised By: Dr. Farach (or treating physician)
  • Document Type: Treatment Plan - Initial
  • Template Name: HDR Cylinder
Do Not Mark Complete

UNCHECK 'Completed' to prevent premature physician sign-off before physics approval.

48. Save Document

  • Click OK (NOT Sign Off)

6.2 Additional Documents (First Planning Only)

Only for Initial Planning

Complete steps 49–51 only if this is the patient's first planning session.

6.2.1 HDR Vaginal Cylinder Consult

49. Create Consult Document

  • Quicklinks > Documents > New
  • Click Template > Check Show All Templates
  • Select HDR Vaginal Cylinder Consult > OK
  • Supervisor: Physician name
  • UNCHECK 'Completed'
Institution Selection

If HDR Vaginal Cylinder Consult is unavailable, verify correct institution (HMH) is selected.

50. Complete Template Fields

  • Treatment Length: 4 cm (standard for Dr. Farach)
  • Diameter of Cylinder: X cm (measured value)
  • Dose to Depth: 600 cGy to depth of 0.0 cm
  • D2cc Bladder: ___ cGy (from Plan-COMBO PDF ÷ 5)
  • D2cc Rectum: ___ cGy (from Plan-COMBO PDF ÷ 5)
  • Click OK (NOT Sign Off)
Cylinder Consult
Dose Adjustments

If physician modifies isodose lines during review: recalculate dose, regenerate all documents, re-upload combined PDF, and update doses in this document.

6.2.2 Treatment Plan Note

51. Create HDR Treatment Plan Note

  • New > Template > Check Show All Templates
  • Select Tx Plan HDR Note - HMH > OK
  • Supervisor: Physician name
  • UNCHECK 'Completed'
  • Complete fields:
    • Plan type: 3D Plan (because CT-Sim is used as basis)
    • Number of Channels: 1 (only 1 channel in cylinder)
    • Number of Basic Dosimetry Calculations: 1 (secondary calculation via Mobius with one reference point)
  • Click OK (NOT Sign Off)

7. Scheduling and Billing

7.1 Schedule Treatment

52. Schedule Fractions

  • Quicklinks > Treatment Management > Plan Scheduling
  • In Scheduling Overview panel: Shift+Click+Drag across boxes equal to number of fractions
  • Click Insert to add blue treatment blocks
  • Click Save icon Save icon
Plan Scheduling

7.2 Billing

Do Not Bill for Practice Cases

Skip billing steps if only practicing plan creation.

53. Open Charge Manual

  • Location: Physics Drive > 1. Methodist Dunn > HDR Main > Charge Manual
Charge Manual
  • Navigate to HDR Vaginal Cylinder sheet
  • Note all CPT codes in Plan Day section with PHY as responsible party

54. Access EMR Summary

  • Quicklinks > EMR > Summary
  • Click Tasks tab Tasks tab

55. Create Prepare Plan Task

  • Click New button New button
  • Activity: Select Prepare Plan from dropdown

56. Add Physics Staff

  • Click Add below Activity box
  • Find and highlight Physics in Resource/Staff menu Add physics
  • Add to right side
  • In Staff list below, find your name and add to right side
  • Check your name > OK
Physics Task

57. Complete and Capture Task

  • Set Status: Completed Status
  • Click OK at bottom of Task Dialog
  • Back in Tasks tab, scroll to Prepare Plan activity
  • Right-click > Activity Capture!

58. Add Billing Codes

  • Click Add More Procedure Codes
  • Check Show All Procedure Codes
  • Add all codes from Step 53
  • Special note: If CT-Sim used, check 77295 INSTEAD of 7731X codes
  • Click Save Edits

8. Subsequent Fractions

8.1 Create Decay-Corrected Plans

59. Copy Plan for Next Fraction

  • Quicklinks > Treatment Planning > Brachytherapy Planning
  • Open course
  • Right-click PLAN (e.g., HDR_CYL___cm) > Copy Plan
  • Right-click COURSE (e.g., C1a) > Paste Plan

60. Rename Plan

  • Plan ID: Cylfx___ (fill in fraction number)
  • Example: Cylfx2, Cylfx3, etc.

61. Adjust Plan Date

  • Open plan properties
  • Update date to match scheduled treatment date
  • Ensures correct source decay calculation
Copy Plan

8.2 Generate Decay Calculation Report

62. Create Brief Report

  • Window > Brief Report Window
  • Press Ctrl+P
  • Printer: Microsoft Print to PDF
  • OK
  • Save as: DecayCalc_CYL_XXmm_FxN
  • Example: DecayCalc_CYL_25mm_Fx2
Brief Report

8.3 Upload Fraction Reports

63. Import on Treatment Day

  • On day of treatment: Quicklinks > EMR > Documents
  • Click Import
  • Select DecayCalc_CYL_XXmm_FxN from patient folder
  • Click Open

64. Configure Document Properties

  • Authored By: Your name
  • Supervised By: Dr. Farach
  • Document Type: Treatment Plan - Decay Calc
  • Template Name: Cylinder Fx___
  • UNCHECK 'Completed'
  • Click OK (NOT Sign Off)

Appendix A: Keyboard Shortcuts

Action Shortcut
Reload all Alt+F, R
Switch contouring tools Right-click to highlight, then select
Window level adjustment Shift + Move Mouse
Auto window level Alt+V, A
Create structure Alt+S, Enter
Fill structure info Down, Tab, type name, Enter
Rotate plane views Ctrl+R
Blend fusion Ctrl+A
Skip slices Alt+Mouse Wheel
Delete contour Select Pencil, Delete
Hide all except selected Hold H
Show/hide in adjacent slices Alt+V, S, Enter
Toggle 2D/3D brush 2
Toggle static/adaptive brush A
Brush as eraser Hold Shift
Adjust brush diameter Right-click and drag left/right
Copy/paste contours Ctrl+C, Ctrl+V

Appendix B: Manual Planning (Training Only)

For Resident Training Only

This method is for educational purposes. Use template-based workflow for clinical cases.

B.1 Orient Cylinder and Set User Origin

1. Orient Cylinder (see Section 3.4)

  • Rotate sagittal and coronal planes to ensure cylinder is roughly vertical
  • Define user origin at tip of applicator

B.2 Manual Plan Creation

2. Insert Plan Manually

  • Select course > Insert > New Plan
  • Click Next with course highlighted
  • Highlight treatment prescription > Check Select > Next
  • Highlight cylinder as target > Next

3. Configure Plan Properties

  • ID & Name: HDR Cyl___cm
  • Protocol Plan: Cylinder Dunn\Cylinder
  • Target Volume: Cylinder
  • Technique: Intracavitary
  • Treatment Percentage: 100%
  • Dose per Fraction: 600 cGy
  • Number of Fractions: 5
  • Click OK

B.3 Insert Applicator

4. Add Applicator

  • Insert > New Applicator > Bravos - Dunn
  • Configure Applicator Properties:
    • Channel Length: 125 cm (always for HMH cylinders)
    • Step Size: 0.5 cm
    • 1st Source Position: 0.3 cm
    • Last Source Position: 4.3 cm
  • Click OK
Applicator Properties

B.4 Digitize Applicator

Method 1: Two-Point Method

5. Draw Applicator

  • After inserting applicator, drawing button Draw button becomes active
  • Navigate to cylinder tip in axial view (where low intensity cavity vanishes)
  • Click at center of channel (defines end of source positions)
  • Move inferiorly to applicator base
  • Click at center of channel (defines start)
Two-Point Method

Method 2: Multi-Point Method

  • Ensure proper rotation (channel vertical)
  • Use Contour Editor button Contour Editor
  • Click multiple points along central channel from base to tip

B.5 Create Reference Line

6. Add Reference Line

  • Highlight CT study (e.g., CT_1)
  • Insert > New Reference Line > OK
  • On coronal plane containing User Origin:
    • Click along cylinder surface from one side to other
    • Position at level of last dwell position
  • Click Selection Tool Selection tool to exit reference line mode
Reference Line

B.6 Initial Dose Calculation

7. Run Volume Optimization

  • Planning > Modify Dose > VEGO TG-43 Volume Optimization
  • Click OK at normal tissue structure creation prompt

8. Configure Optimization

  • Set Smoothness: Middle of meter (Top High = Coarse, Top Low = Finer DVH)
  • Create objectives:
    • Highlight Reference Line
    • Click Add Upper & Lower Objective Add objectives
    • Desired dose: 3000 cGy (prescription amount per fraction) > OK

9. Set Lower Objective

  • Volume: 99%
  • Dose: 3000 cGy (100%)
  • Priority: 100

10. Set Upper Objective

  • Volume: 1%
  • Dose: 3005 cGy (100.17%)
  • Priority: 100

11. Optimize and Calculate

  • Click Optimize
  • Click Calculate 3D dose button Calculate 3D dose

B.7 Modify Isodose Display

12. Set Isodose Levels (see Section 3.5)

B.8 Dose Shaping

13. Shape Dose Distribution

  • Click Dose Shaper tool Dose Shaper
  • Right-click in views > Dose Shaping Effect > Select Local > OK
  • On frontal/sagittal views: Ctrl+Drag near 100% red isodose line
  • Shape onto cylinder surface
Alternative Tool

Use Dose Re-Scaler if dose shape is correct but not aligned. This allows proportional scaling of dwell times while retaining shape.

14. Save Plan

Appendix C: Troubleshooting

Common Issue: Improper Template Positioning

Problem: Template positioned inferior to correct location

Identification:

  • End of digitized channel does not coincide with end of channel cavity
  • Low attenuation region in cylinder center misaligned
Case Study

Solution:

  • Use Move applicator tool to reposition template
  • Align digitized channel end with visible cavity end
  • Verify alignment in all three planes
Educational Disclaimer

These resources and tools were developed by Ivan Vazquez for current and future medical physics residents. They are provided solely for educational and informational purposes and are not intended for clinical use, patient care, treatment planning decisions, quality assurance sign-off, or as official clinical guidance. Always follow current institution-approved policies, procedures, supervision requirements, and direction from qualified clinical staff for all clinical activities.